Advancing quantitative analysis with batch object analysis and AI based segmentation

15:40 – 16:40 BST, 5 June 2024 ‐ 1 hour

SVI - Huygens Software

Danielle Mijnheer, Jasper van der Rijst

On Stand Workshop - Stand 2

Designing a complete 3D restoration and analysis pipelines, and applying this in batch mode, is a challenge that can be easily addressed with Huygens Object Analyzer and Workflow Processor. Massive image processing with such pipelines can also be executed using Huygens new Command Line interface in combination with node/job management software. Recent additions to the Object Analyzer involves segmentation tailored towards your research with options to upload label images from AI-based tools like Cellpose and Stardist. Together with Huygens renowned deconvolution and restoration options, the Workfow Processor streamlines the whole process from image acquisition to producing true quantitative data.

During this workshop session we show how to combine image restoration with object analysis within pipelines, and how to apply AI-based segmentation in Huygens. We will also present a short overview of all other new features in Huygens.

Scientific Volume Imaging_02